Transcript: lnc-C17orf80-3:4

Basic information

LNCipedia transcript ID: lnc-C17orf80-3:4 
LNCipedia gene ID: lnc-C17orf80-3
Ensembl Gene ID: ENSG00000264985
Ensembl Transcript ID: ENST00000583547
Location (hg38): chr17:73513612-73518770
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2349 bp
Exons: 2
Sources: Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000583547.2
Alternative gene names: ENSG00000264985.2; RP11-449L23.2; AC124804.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -74.0364 non-coding 
CPAT coding probability 6.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C17orf80-3:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C17orf80-3:4
5.0 lnc-C17orf80-3:4
5.1 lnc-TMEM94-48:2
5.2 lnc-C17orf80-3:4