Transcript: lnc-C17orf97-1:3

Basic information

LNCipedia transcript ID: lnc-C17orf97-1:3 
LNCipedia gene ID: lnc-C17orf97-1
Location (hg38): chr17:356601-358163
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1055 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_1393_chr17:206391-207954_kidney
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -135.7914 non-coding 
CPAT coding probability 45.49% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-C17orf97-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C17orf97-1:3
4.0 lnc-C17orf97-1:3
4.1 lnc-C17orf97-1:3
5.0 lnc-C17orf97-1:3
5.1 lnc-RPA1-61:4
5.2 lnc-C17orf97-1:3