Transcript: lnc-C19orf25-2:2

Basic information

LNCipedia transcript ID: lnc-C19orf25-2:2 
LNCipedia gene ID: lnc-C19orf25-2
Location (hg38): chr19:1457665-1458591
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 927 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT060307; ENST00000591252.1
Alternative gene names: ENSG00000267317.1; CTB-25B13.12


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.9088 non-coding 
CPAT coding probability 14.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C19orf25-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C19orf25-2:2
4.0 lnc-C19orf25-2:2
4.1 lnc-C19orf25-2:2
5.0 lnc-C19orf25-2:2
5.1 lnc-ZNF77-96:2
5.2 lnc-C19orf25-2:2