Transcript: lnc-C19orf48-1:4

Basic information

LNCipedia transcript ID: lnc-C19orf48-1:4 
LNCipedia gene ID: lnc-C19orf48-1
RefSeq ID: NR_134883
Location (hg38): chr19:50776141-50786210
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 588 bp
Exons: 4
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_134883.1
Alternative gene names: LOC105372440


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 223.5 coding 
CPAT coding probability 3.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-C19orf48-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-FAM71E1-19:2
5.1 lnc-FAM71E1-19:2
5.2 lnc-C19orf48-1:4