Transcript: lnc-C19orf57-6:6

Basic information

LNCipedia transcript ID: lnc-C19orf57-6:6 
LNCipedia gene ID: lnc-C19orf57-6
Ensembl Gene ID: ENSG00000267519
Ensembl Transcript ID: ENST00000587762
RefSeq ID: NR_036515
Location (hg38): chr19:13834516-13836289
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1774 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT061356; NR_036515; ENST00000587762.1; NR_036515.1
Alternative gene names: ENSG00000267519.2; MIR24-2; ENSG00000267519.3; CTD-3252C9.4; ENSG00000267519.4; ENSG00000267519.5; AC020916.1; LOC284454


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 20.5385 non-coding 
CPAT coding probability 6.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C19orf57-6:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC008686.1-6:2
4.0 lnc-AC008686.1-6:2
4.1 lnc-C19orf57-6:6
5.0 lnc-C19orf57-6:6
5.1 lnc-PALM3-11:6
5.2 lnc-C19orf57-6:6