Transcript: lnc-C19orf71-3:1

Basic information

LNCipedia transcript ID: lnc-C19orf71-3:1 
LNCipedia gene ID: lnc-C19orf71-3
Ensembl Gene ID: ENSG00000267436
Ensembl Transcript ID: ENST00000589360
Location (hg38): chr19:3544199-3557569
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 565 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT060528; ENST00000589360.1
Alternative gene names: ENSG00000267436.1; AC005786.7; AC005786.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -293.3893 non-coding 
CPAT coding probability 2.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C19orf71-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C19orf71-3:1
4.0 lnc-C19orf71-3:1
4.1 lnc-C19orf71-3:1
5.0 lnc-C19orf71-3:1
5.1 lnc-RPL36-68:1
5.2 lnc-C19orf71-3:1