Transcript: lnc-C19orf85-1:1

Basic information

LNCipedia transcript ID: lnc-C19orf85-1:1 
LNCipedia gene ID: lnc-C19orf85-1
Location (hg38): chr19:55467045-55473540
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1161 bp
Exons: 5
Sources: Nielsen et al.,2014
Alternative transcript names: l_1715_chr19:55978411-55981857_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 13.8544 non-coding 
CPAT coding probability 0.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C19orf85-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ISOC2-1:1
4.0 lnc-ISOC2-1:1
4.1 lnc-ISOC2-1:1
5.0 lnc-ISOC2-1:1
5.1 lnc-NLRP9-11:1
5.2 lnc-C19orf85-1:1