Transcript: lnc-C19orf85-4:1

Basic information

LNCipedia transcript ID: lnc-C19orf85-4:1 
LNCipedia gene ID: lnc-C19orf85-4
Ensembl Gene ID: ENSG00000269859
Ensembl Transcript ID: ENST00000596646
Location (hg38): chr19:55475983-55476482
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 500 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT068042; ENST00000596646.1
Alternative gene names: ENSG00000269859.1; CTD-2537I9.16; AC008735.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -164.9789 non-coding 
CPAT coding probability 1.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C19orf85-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ISOC2-2:1
4.0 lnc-ISOC2-2:1
4.1 lnc-ISOC2-2:1
5.0 lnc-ISOC2-2:1
5.1 lnc-NLRP9-10:1
5.2 lnc-C19orf85-4:1