Transcript: lnc-C1GALT1-1:4

Basic information

LNCipedia transcript ID: lnc-C1GALT1-1:4 
LNCipedia gene ID: lnc-C1GALT1-1
RefSeq ID: NR_108073
Location (hg38): chr7:7255154-7278069
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 761 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_108073; NR_108073.1
Alternative gene names: LOC101927354


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -159.0714 non-coding 
CPAT coding probability 1.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C1GALT1-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C1GALT1-1:4
4.0 lnc-C1GALT1-1:4
4.1 lnc-C1GALT1-1:4
5.0 lnc-C1GALT1-1:4
5.1 lnc-SLC29A4-35:2
5.2 lnc-C1GALT1-1:4