Transcript: lnc-C1QTNF3-AMACR-1:1

Basic information

LNCipedia transcript ID: lnc-C1QTNF3-AMACR-1:1 
LNCipedia gene ID: lnc-C1QTNF3-AMACR-1
RefSeq ID: NR_037951
Location (hg38): chr5:33986986-34124528
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 3612 bp
Exons: 9
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_037951; NR_037951.1
Alternative gene names: C1QTNF3-AMACR


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2255.3431 coding 
CPAT coding probability 99.68% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-C1QTNF3-AMACR-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C1QTNF3-1:1
4.0 lnc-C1QTNF3-1:1
4.1 lnc-C1QTNF3-1:1
5.0 lnc-C1QTNF3-1:1
5.1 lnc-SELENOP-102:1
5.2 lnc-C1QTNF3-AMACR-1:1