Transcript: lnc-C1orf61-2:29

Basic information

LNCipedia transcript ID: lnc-C1orf61-2:29 
LNCipedia gene ID: lnc-C1orf61-2
Location (hg38): chr1:156398670-156407275
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 688 bp
Exons: 5
Sources: Nielsen et al.,2014
Alternative transcript names: l_137_chr1:156368461-156377067_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.2435 non-coding 
CPAT coding probability 0.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C1orf61-2:29 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MEF2D-2:25
4.0 lnc-C1orf61-2:29
4.1 lnc-C1orf61-2:29
5.0 lnc-C1orf61-2:29
5.1 lnc-PAQR6-9:34
5.2 lnc-C1orf61-2:29