Transcript: lnc-C1orf61-2:40

Basic information

LNCipedia transcript ID: lnc-C1orf61-2:40 
LNCipedia gene ID: lnc-C1orf61-2
Location (hg38): chr1:156450916-156451435
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 520 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: predAs_ge08_CD1D_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -29.3653 non-coding 
CPAT coding probability 3.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C1orf61-2:40 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MEF2D-3:1
4.0 lnc-MEF2D-3:1
4.1 lnc-C1orf61-2:40
5.0 lnc-C1orf61-2:40
5.1 lnc-PAQR6-9:13
5.2 lnc-C1orf61-2:40