Transcript: lnc-C21orf58-1:7

Basic information

LNCipedia transcript ID: lnc-C21orf58-1:7 
LNCipedia gene ID: lnc-C21orf58-1
Location (hg38): chr21:46454950-46458539
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 3590 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000057045.1|FTMT28200002270.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 32.493 non-coding 
CPAT coding probability 9.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C21orf58-1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C21orf58-1:7
5.0 lnc-C21orf58-1:7
5.1 lnc-SLC19A1-26:9
5.2 lnc-C21orf58-1:7