Transcript: lnc-C21orf62-7:2

Basic information

LNCipedia transcript ID: lnc-C21orf62-7:2 
LNCipedia gene ID: lnc-C21orf62-7
RefSeq ID: NR_109961
Location (hg38): chr21:33111704-33123700
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1353 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_109961; NR_109961.1
Alternative gene names: LOC101928107


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -110.2279 non-coding 
CPAT coding probability 2.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C21orf62-7:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C21orf54-1:2
4.0 lnc-C21orf54-1:2
4.1 lnc-C21orf54-1:2
5.0 lnc-C21orf54-1:2
5.1 lnc-TMEM50B-1:4
5.2 lnc-C21orf62-7:2