Transcript: lnc-C22orf42-2:4

Basic information

LNCipedia transcript ID: lnc-C22orf42-2:4 
LNCipedia gene ID: lnc-C22orf42-2
Location (hg38): chr22:32112228-32121655
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 577 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT084937
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 32.5193 non-coding 
CPAT coding probability 7.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C22orf42-2:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C22orf42-2:4
4.0 lnc-C22orf42-2:4
4.1 lnc-C22orf42-2:4
5.0 lnc-C22orf42-2:4
5.1 lnc-SYN3-15:2
5.2 lnc-C22orf42-2:4