Transcript: lnc-C2CD4A-6:2

Basic information

LNCipedia transcript ID: lnc-C2CD4A-6:2 
LNCipedia gene ID: lnc-C2CD4A-6
Location (hg38): chr15:61404114-61411211
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 723 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00023435; NONHSAT044249
Alternative gene names: XLOC_011275; linc-C2CD4A-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -359.0381 non-coding 
CPAT coding probability 13.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C2CD4A-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C2CD4A-5:2
3.1 lnc-C2CD4A-6:2
4.0 lnc-C2CD4A-6:2
4.1 lnc-C2CD4A-6:2
5.0 lnc-C2CD4A-6:2
5.1 lnc-MAP2K1-75:3
5.2 lnc-C2CD4A-6:2