Transcript: lnc-C2orf54-1:5

Basic information

LNCipedia transcript ID: lnc-C2orf54-1:5 
LNCipedia gene ID: lnc-C2orf54-1
Location (hg38): chr2:240954619-240967451
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2272 bp
Exons: 9
Sources: Refseq - Dec 2014
Alternative transcript names: NR_033841
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.0637 non-coding 
CPAT coding probability 33.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C2orf54-1:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C2orf54-1:5
4.0 lnc-C2orf54-1:5
4.1 lnc-C2orf54-1:5
5.0 lnc-C2orf54-1:5
5.1 lnc-STK25-20:3
5.2 lnc-C2orf54-1:5