Transcript: lnc-C2orf54-1:6

Basic information

LNCipedia transcript ID: lnc-C2orf54-1:6 
LNCipedia gene ID: lnc-C2orf54-1
Location (hg38): chr2:240958744-240959291
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 431 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT077869
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -13.4997 non-coding 
CPAT coding probability 3.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C2orf54-1:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C2orf54-1:6
4.0 lnc-C2orf54-1:6
4.1 lnc-C2orf54-1:6
5.0 lnc-C2orf54-1:6
5.1 lnc-STK25-20:6
5.2 lnc-C2orf54-1:6