Transcript: lnc-C2orf91-2:1

Basic information

LNCipedia transcript ID: lnc-C2orf91-2:1 
LNCipedia gene ID: lnc-C2orf91-2
Location (hg38): chr2:41877074-41877955
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 534 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00003259; NONHSAT070297
Alternative gene names: XLOC_002058; linc-SLC8A1-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -223.731 non-coding 
CPAT coding probability 0.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C2orf91-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC013480.1.1-2:1
3.1 lnc-AC013480.1.1-2:1
4.0 lnc-AC013480.1.1-2:1
4.1 lnc-AC013480.1.1-2:1
5.0 lnc-AC013480.1.1-2:1
5.1 lnc-MAP4K3-50:1
5.2 lnc-C2orf91-2:1