Transcript: lnc-C3orf30-5:1

Basic information

LNCipedia transcript ID: lnc-C3orf30-5:1 
LNCipedia gene ID: lnc-C3orf30-5
Location (hg38): chr3:117657929-117662299
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 477 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00006167; NONHSAT091335
Alternative gene names: XLOC_002772; linc-C3orf30-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -218.1818 non-coding 
CPAT coding probability 0.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C3orf30-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C3orf30-4:1
3.1 lnc-C3orf30-5:1
4.0 lnc-C3orf30-5:1
4.1 lnc-C3orf30-5:1
5.0 lnc-C3orf30-5:1
5.1 lnc-TIMMDC1-44:1
5.2 lnc-C3orf30-5:1