Transcript: lnc-C3orf58-12:2

Basic information

LNCipedia transcript ID: lnc-C3orf58-12:2 
LNCipedia gene ID: lnc-C3orf58-12
Location (hg38): chr3:145554448-145554671
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 367 bp
Exons: 2
Sources: Hangauer et al., 2013
Alternative transcript names: FPKM1_group_22147_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -4.6157 non-coding 
CPAT coding probability 2.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C3orf58-12:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC107021.1-7:2
4.0 lnc-AC107021.1-7:2
4.1 lnc-AC107021.1-7:2
5.0 lnc-AC107021.1-7:2
5.1 lnc-ZIC1-13:2
5.2 lnc-C3orf58-12:2