Transcript: lnc-C5orf58-1:2

Basic information

LNCipedia transcript ID: lnc-C5orf58-1:2 
LNCipedia gene ID: lnc-C5orf58-1
Location (hg38): chr5:170389490-170396424
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 6935 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000253647.1|ENCT00000353007.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 2.2494 non-coding 
CPAT coding probability 1.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C5orf58-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C5orf58-1:2
5.0 lnc-C5orf58-1:2
5.1 lnc-ATP6V0E1-83:1
5.2 lnc-C5orf58-1:2