Transcript: lnc-C5orf58-1:4

Basic information

LNCipedia transcript ID: lnc-C5orf58-1:4 
LNCipedia gene ID: lnc-C5orf58-1
Location (hg38): chr5:170389490-170422844
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1218 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000253647.1|ENST00000518387.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -107.4921 non-coding 
CPAT coding probability 3.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C5orf58-1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C5orf58-1:4
5.0 lnc-C5orf58-1:4
5.1 lnc-ATP6V0E1-83:3
5.2 lnc-C5orf58-1:4