Transcript: lnc-C5orf58-5:2

Basic information

LNCipedia transcript ID: lnc-C5orf58-5:2 
LNCipedia gene ID: lnc-C5orf58-5
Location (hg38): chr5:170270943-170311114
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1323 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000235172.3|MICT00000293003.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -104.3083 non-coding 
CPAT coding probability 6.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C5orf58-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C5orf58-5:2
5.0 lnc-C5orf58-5:2
5.1 lnc-ATP6V0E1-89:2
5.2 lnc-C5orf58-5:2