Transcript: lnc-C5orf63-1:13

Basic information

LNCipedia transcript ID: lnc-C5orf63-1:13 
LNCipedia gene ID: lnc-C5orf63-1
Ensembl Gene ID: ENSG00000283897
Ensembl Transcript ID: ENST00000640865
Location (hg38): chr5:127227617-127229754
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 635 bp
Exons: 3
Sources: Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000640865.1
Alternative gene names: ENSG00000283897.1; AC011416.4; AC011416.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -284.5215 non-coding 
CPAT coding probability 0.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C5orf63-1:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-LOX-76:10
5.1 lnc-LOX-76:10
5.2 lnc-C5orf63-1:13