Transcript: lnc-C5orf67-2:1

Basic information

LNCipedia transcript ID: lnc-C5orf67-2:1 
LNCipedia gene ID: lnc-C5orf67-2
Location (hg38): chr5:56511715-56533133
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 238 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00010343; NONHSAT101544
Alternative gene names: XLOC_004830; linc-ANKRD55-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -177.3366 non-coding 
CPAT coding probability 12.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C5orf67-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CTC-236F12.4.1-2:1
3.1 lnc-CTC-236F12.4.1-2:1
4.0 lnc-AC022431.2.1-2:1
4.1 lnc-AC022431.2.1-2:1
5.0 lnc-AC022431.2.1-2:1
5.1 lnc-ACTBL2-13:1
5.2 lnc-C5orf67-2:1