Transcript: lnc-C6orf120-3:1

Basic information

LNCipedia transcript ID: lnc-C6orf120-3:1 
LNCipedia gene ID: lnc-C6orf120-3
Ensembl Gene ID: ENSG00000266896
Ensembl Transcript ID: ENST00000586101
Location (hg38): chr6:169770413-169772042
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1630 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT116227; ENST00000586101.1
Alternative gene names: ENSG00000266896.1; RP1-266L20.9; AL354892.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -2.1304 non-coding 
CPAT coding probability 3.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C6orf120-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C6orf120-3:1
4.0 lnc-C6orf120-3:1
4.1 lnc-C6orf120-3:1
5.0 lnc-C6orf120-3:1
5.1 lnc-SYTL3-121:1
5.2 lnc-C6orf120-3:1