Transcript: lnc-C6orf132-1:1

Basic information

LNCipedia transcript ID: lnc-C6orf132-1:1 
LNCipedia gene ID: lnc-C6orf132-1
Location (hg38): chr6:42092238-42094259
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2022 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000562471.1; RP11-7K24.3-001; OTTHUMT00000431267.1; NONHSAT112793
Alternative gene names: ENSG00000261068.1; RP11-7K24.3; OTTHUMG00000175914.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -37.2657 non-coding 
CPAT coding probability 6.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C6orf132-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C6orf132-1:1
4.0 lnc-C6orf132-1:1
4.1 lnc-C6orf132-1:1
5.0 lnc-C6orf132-1:1
5.1 lnc-TREML2-36:2
5.2 lnc-C6orf132-1:1