Transcript: lnc-C6orf132-1:3

Basic information

LNCipedia transcript ID: lnc-C6orf132-1:3 
LNCipedia gene ID: lnc-C6orf132-1
Ensembl Gene ID: ENSG00000261068
Ensembl Transcript ID: ENST00000562471
Location (hg38): chr6:42092233-42094259
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2027 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000562471.2
Alternative gene names: ENSG00000261068.2; RP11-7K24.3; AL512274.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -37.2657 non-coding 
CPAT coding probability 6.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C6orf132-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-C6orf132-1:3
4.1 lnc-C6orf132-1:3
5.0 lnc-C6orf132-1:3
5.1 lnc-TREML2-36:3
5.2 lnc-C6orf132-1:3