Transcript: lnc-C6orf141-1:5

Basic information

LNCipedia transcript ID: lnc-C6orf141-1:5 
LNCipedia gene ID: lnc-C6orf141-1
RefSeq ID: NR_125839
Location (hg38): chr6:49811540-49820503
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 502 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_125839; NR_125839.1
Alternative gene names: LOC101927020


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -42.065 non-coding 
CPAT coding probability 1.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C6orf141-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C6orf141-1:5
4.0 lnc-C6orf141-1:5
4.1 lnc-C6orf141-1:5
5.0 lnc-C6orf141-1:5
5.1 lnc-EFHC1-32:1
5.2 lnc-C6orf141-1:5