Transcript: lnc-C6orf223-1:2

Basic information

LNCipedia transcript ID: lnc-C6orf223-1:2 
LNCipedia gene ID: lnc-C6orf223-1
Location (hg38): chr6:43999006-44046184
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 2281 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: refGeneNc_555_NR_024478
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -5.1874 non-coding 
CPAT coding probability 98.76% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-C6orf223-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C6orf223-1:2
4.0 lnc-C6orf223-1:2
4.1 lnc-C6orf223-1:2
5.0 lnc-C6orf223-1:2
5.1 lnc-TREML4-73:1
5.2 lnc-C6orf223-1:2