Transcript: lnc-C8orf34-1:7

Basic information

LNCipedia transcript ID: lnc-C8orf34-1:7 
LNCipedia gene ID: lnc-C8orf34-1
Location (hg38): chr8:68989375-69184720
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4898 bp
Exons: 6
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000099244.1|MICT00000345529.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 4.4502 non-coding 
CPAT coding probability 2.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C8orf34-1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C8orf34-1:7
5.0 lnc-C8orf34-1:7
5.1 lnc-C8orf34-1:7
5.2 lnc-C8orf34-1:7