Transcript: lnc-C8orf48-1:7

Basic information

LNCipedia transcript ID: lnc-C8orf48-1:7 
LNCipedia gene ID: lnc-C8orf48-1
RefSeq ID: NR_134450
Location (hg38): chr8:13629690-13632576
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 948 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_134450.1
Alternative gene names: LOC102725080


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -105.932 non-coding 
CPAT coding probability 1.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C8orf48-1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-PCM1-38:5
5.1 lnc-PCM1-38:5
5.2 lnc-C8orf48-1:7