Transcript: lnc-C9orf135-1:2

Basic information

LNCipedia transcript ID: lnc-C9orf135-1:2 
LNCipedia gene ID: lnc-C9orf135-1
Location (hg38): chr9:69760143-69761010
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 868 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000105497.1|ENCT00000446672.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -64.2211 non-coding 
CPAT coding probability 0.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C9orf135-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C9orf135-1:2
5.0 lnc-C9orf135-1:2
5.1 lnc-TMC1-30:1
5.2 lnc-C9orf135-1:2