Transcript: lnc-C9orf50-4:4

Basic information

LNCipedia transcript ID: lnc-C9orf50-4:4 
LNCipedia gene ID: lnc-C9orf50-4
Location (hg38): chr9:129431331-129432627
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 732 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00016489; NONHSAT135063
Alternative gene names: XLOC_007867; linc-IER5L-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -63.2022 non-coding 
CPAT coding probability 1.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C9orf50-4:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C9orf50-3:4
3.1 lnc-C9orf50-4:4
4.0 lnc-C9orf50-4:4
4.1 lnc-C9orf50-4:4
5.0 lnc-C9orf50-4:4
5.1 lnc-SPOUT1-27:11
5.2 lnc-C9orf50-4:4