Transcript: lnc-C9orf50-4:5

Basic information

LNCipedia transcript ID: lnc-C9orf50-4:5 
LNCipedia gene ID: lnc-C9orf50-4
Location (hg38): chr9:129470205-129497324
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 26988 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000230676.1|ENCT00000461352.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 13.3472 non-coding 
CPAT coding probability 38.75% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-C9orf50-4:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C9orf50-4:5
5.0 lnc-C9orf50-4:5
5.1 lnc-SPOUT1-27:1
5.2 lnc-C9orf50-4:5