Transcript: lnc-C9orf50-4:9

Basic information

LNCipedia transcript ID: lnc-C9orf50-4:9 
LNCipedia gene ID: lnc-C9orf50-4
Location (hg38): chr9:129442699-129482875
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 17929 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000230676.1|MICT00000367468.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 22.5652 non-coding 
CPAT coding probability 12.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C9orf50-4:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C9orf50-4:9
5.0 lnc-C9orf50-4:9
5.1 lnc-SPOUT1-27:3
5.2 lnc-C9orf50-4:9