Transcript: lnc-C9orf72-3:2

Basic information

LNCipedia transcript ID: lnc-C9orf72-3:2 
LNCipedia gene ID: lnc-C9orf72-3
Location (hg38): chr9:28067555-28146038
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 372 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT130624
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -157.1333 non-coding 
CPAT coding probability 0.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C9orf72-3:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C9orf72-3:2
4.0 lnc-C9orf72-3:2
4.1 lnc-C9orf72-3:2
5.0 lnc-C9orf72-3:2
5.1 lnc-CD72-90:2
5.2 lnc-C9orf72-3:2