Transcript: lnc-CA5A-4:10

Basic information

LNCipedia transcript ID: lnc-CA5A-4:10 
LNCipedia gene ID: lnc-CA5A-4
Location (hg38): chr16:88177440-88186090
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 476 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT144364; ENST00000596422.1
Alternative gene names: ENSG00000261327.3; RP11-863P13.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -167.1696 non-coding 
CPAT coding probability 3.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CA5A-4:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CA5A-4:10
4.0 lnc-CA5A-4:10
4.1 lnc-CA5A-4:10
5.0 lnc-CA5A-4:10
5.1 lnc-KLHDC4-20:4
5.2 lnc-CA5A-4:10