Transcript: lnc-CA5B-1:1

Basic information

LNCipedia transcript ID: lnc-CA5B-1:1 
LNCipedia gene ID: lnc-CA5B-1
Location (hg38): chrX:15674916-15703351
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 994 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT136352; NR_026551
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -68.9682 non-coding 
CPAT coding probability 98.16% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CA5B-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CA5B-1:1
4.0 lnc-CA5B-1:1
4.1 lnc-CA5B-1:1
5.0 lnc-CA5B-1:1
5.1 lnc-GK-118:1
5.2 lnc-CA5B-1:1