Transcript: lnc-CAB39L-10:2

Basic information

LNCipedia transcript ID: lnc-CAB39L-10:2 
LNCipedia gene ID: lnc-CAB39L-10
Ensembl Gene ID: ENSG00000275202
Ensembl Transcript ID: ENST00000619666
Location (hg38): chr13:48974967-48976867
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1101 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000619666.1
Alternative gene names: ENSG00000275202.1; RP11-156K23.3; AL161421.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -77.1327 non-coding 
CPAT coding probability 27.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CAB39L-10:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-CAB39L-4:3
4.1 lnc-CAB39L-4:3
5.0 lnc-CAB39L-4:3
5.1 lnc-CCDC169-147:2
5.2 lnc-CAB39L-10:2