Transcript: lnc-CAB39L-3:2

Basic information

LNCipedia transcript ID: lnc-CAB39L-3:2 
LNCipedia gene ID: lnc-CAB39L-3
Location (hg38): chr13:49533918-49539503
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 688 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT033752
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 108.9018 coding 
CPAT coding probability 2.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CAB39L-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL136218.1-3:1
4.0 lnc-AL136218.1-3:1
4.1 lnc-AL136218.1-3:1
5.0 lnc-AL136218.1-3:1
5.1 lnc-CCDC169-153:1
5.2 lnc-CAB39L-3:2