Transcript: lnc-CABCOCO1-1:7

Basic information

LNCipedia transcript ID: lnc-CABCOCO1-1:7 
LNCipedia gene ID: lnc-CABCOCO1-1
Location (hg38): chr10:61481850-61493462
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 304 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00018215; NONHSAT013566
Alternative gene names: XLOC_008495; linc-C10orf107-1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -131.7405 non-coding 
CPAT coding probability 0.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CABCOCO1-1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C10orf107-1:2
3.1 lnc-C10orf107-1:2
4.0 TMEM26-AS1:9
4.1 TMEM26-AS1:9
5.0 TMEM26-AS1:9
5.1 lnc-MTRNR2L5-269:7
5.2 lnc-CABCOCO1-1:7