Transcript: lnc-CADM1-40:1

Basic information

LNCipedia transcript ID: lnc-CADM1-40:1 
LNCipedia gene ID: lnc-CADM1-40
RefSeq ID: NR_135066
Location (hg38): chr11:115731945-115734762
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2455 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_135066.1
Alternative gene names: LOC101928985


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 11.6218 non-coding 
CPAT coding probability 1.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CADM1-40:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-DRD2-40:1
5.1 lnc-DRD2-40:1
5.2 lnc-CADM1-40:1