Transcript: lnc-CADM1-6:1

Basic information

LNCipedia transcript ID: lnc-CADM1-6:1 
LNCipedia gene ID: lnc-CADM1-6
Location (hg38): chr11:115518668-115524102
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 761 bp
Exons: 5
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT024308; FPKM1_group_5396_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -177.7178 non-coding 
CPAT coding probability 20.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CADM1-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CADM1-6:1
4.0 lnc-CADM1-6:1
4.1 lnc-CADM1-6:1
5.0 lnc-CADM1-6:1
5.1 lnc-DRD2-36:1
5.2 lnc-CADM1-6:1