Transcript: lnc-CADM2-3:10

Basic information

LNCipedia transcript ID: lnc-CADM2-3:10 
LNCipedia gene ID: lnc-CADM2-3
Location (hg38): chr3:84036340-84128579
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1423 bp
Exons: 8
Sources: Nielsen et al.,2014
Alternative transcript names: l_2403_chr3:84085490-84141354_heart
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -12.1989 non-coding 
CPAT coding probability 0.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CADM2-3:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CADM2-3:10
4.0 lnc-CADM2-3:10
4.1 lnc-CADM2-3:10
5.0 lnc-CADM2-3:10
5.1 lnc-CADM2-3:10
5.2 lnc-CADM2-3:10