Transcript: lnc-CALB2-2:3

Basic information

LNCipedia transcript ID: lnc-CALB2-2:3 
LNCipedia gene ID: lnc-CALB2-2
Location (hg38): chr16:71288860-71302850
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 511 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT143461
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -155.039 non-coding 
CPAT coding probability 1.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CALB2-2:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CALB2-2:3
4.0 lnc-CALB2-2:3
4.1 lnc-CALB2-2:3
5.0 lnc-CALB2-2:3
5.1 lnc-CALB2-2:3
5.2 lnc-CALB2-2:3