Transcript: lnc-CALM2-2:7

Basic information

LNCipedia transcript ID: lnc-CALM2-2:7 
LNCipedia gene ID: lnc-CALM2-2
RefSeq ID: NR_110207
Location (hg38): chr2:47213949-47345074
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 2000 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110207; NR_110207.1
Alternative gene names: LOC101927043


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -68.9549 non-coding 
CPAT coding probability 6.68% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CALM2-2:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CALM2-2:7
4.0 lnc-CALM2-2:7
4.1 lnc-CALM2-2:7
5.0 lnc-CALM2-2:7
5.1 lnc-CALM2-2:7
5.2 lnc-CALM2-2:7