Transcript: lnc-CALR3-7:1

Basic information

LNCipedia transcript ID: lnc-CALR3-7:1 
LNCipedia gene ID: lnc-CALR3-7
Location (hg38): chr19:16441511-16471966
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 567 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT062785
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 837.8402 coding 
CPAT coding probability 12.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CALR3-7:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CALR3-4:3
4.0 lnc-CALR3-4:3
4.1 lnc-CALR3-4:3
5.0 lnc-CALR3-4:3
5.1 lnc-PALM3-74:1
5.2 lnc-CALR3-7:1