Transcript: lnc-CAMK1D-1:2

Basic information

LNCipedia transcript ID: lnc-CAMK1D-1:2 
LNCipedia gene ID: lnc-CAMK1D-1
Location (hg38): chr10:12833973-12835544
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1572 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT011466
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -42.0414 non-coding 
CPAT coding probability 8.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CAMK1D-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CAMK1D-1:2
4.0 lnc-CAMK1D-1:2
4.1 lnc-CAMK1D-1:2
5.0 lnc-CAMK1D-1:2
5.1 lnc-NPY4R2-377:2
5.2 lnc-CAMK1D-1:2